
BB838: Basic bioacoustics and signal analysis
The Study Board for Science
Teaching language: English
EKA: N110071102
Assessment: Second examiner: None
Grading: Pass/Fail
Offered in: Odense
Offered in: Spring
Level: Master's level course approved as PhD course
STADS ID (UVA): N110071101
ECTS value: 5
Date of Approval: 03-10-2024
Duration: 1 semester
Version: Approved - active
Entry requirements
Academic preconditions
Course introduction
This class introduces important mathematical and physical principles of bioacoustics. Programming exercises are used to give the students a basic understanding for the logic of the theoretical material as well as of how to solve computational problems themselves. The programming language used in the course is Matlab and thus example code snippets are given in Matlab. However, the introduced principles and signal analysis concepts are of general nature and can be implemented in most modern programming languages such as R, Python, etc. The course consists of a series of introductory lectures followed by programming tutorials leading up to a final assignment where the students are asked to record and analyze an animal vocalization. Students are free to choose any animal to record for their final assignment but are explicitly invited to record study animals of the Sound Communication and Behaviour Group which are birds, frogs, bats and toothed whales.
Expected learning outcome
The students obtain ‘hands-on’ experience with theoretical work in bioacoustics as well as using computer programming for problem solving and to conceptualize physical principles.
Content
Programming (Matlab):
●Introductory programming
●Writing scripts and functions
●Importing and analyzing acoustic data
●Programming Matlab with GUIs
Mathematics:
●Basic linear and logarithmic machinery
●Fourier analysis
●Filters
Physics (acoustics):
●Near and far fields
●Calibrated sound level measurements
●Transmission loss
●Refraction
●Reflections
●Transmission from one media to another
Literature
Examination regulations
Exam element a)
Timing
Spring
Tests
Final Assignment – Programming tasks
EKA
N110071102
Assessment
Second examiner: None
Grading
Pass/Fail
Identification
Full name and SDU username
Language
Normally, the same as teaching language
Examination aids
To be announced during the course
ECTS value
5
Indicative number of lessons
Teaching Method
At the faculty of science, teaching is organized after the three-phase model ie. intro, training and study phase.
●Intro phase: 20 hours
●Skills training phase: 20 hours, hereof exercises classes: 20 hours
Activities for the study phase: solve programming tasks with Matlab by utilizing provided code snippets and tips in the compendium and from the lecture slides.
Teacher responsible
Additional teachers
Name | Department | City | |
---|---|---|---|
Felix Theo Häfele | fth@biology.sdu.dk | Biologisk Institut | |
Lasse Jakobsen | lasse@biology.sdu.dk | Biologisk Institut |
Timetable
Administrative Unit
Team at Registration
Offered in
Recommended course of study
Transition rules
Transitional arrangements describe how a course replaces another course when changes are made to the course of study.
If a transitional arrangement has been made for a course, it will be stated in the list.
See transitional arrangements for all courses at the Faculty of Science.